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Amaro, José Carlos Rufino
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Publications
selected publications
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conference paper
- A sequenciação de nova geração como uma abordagem promissora para a identificação da origem entomológica do mel. 49-49. 2023
- Bee3Pomics: utilização das “Omics” no estudo dos efeitos dos pesticidas na abelha melífera. 25-25. 2023
- Conservation status of Apis mellifera ruttneri inferred from whole genome sequences. 158-158. 2023
- Projeto MITE- Varroa e vírus transmitidos: MonItorização de muTações e dEsenvolvimento de ferramentas moleculares inovadoras 2023
- Applications of the analog ensembles method to meteorological data reconstruction in the Northeast of Portugal. 13-15. 2022
- Bio-Monitoring of environmental pollution using the citizen science approach. 258-259. 2022
- Honey bee collected pollen for botanical identification via its2 metabarcoding: a comparison of preservation methods for citizen science 2022
- Is diabetic retinopathy grading biased by imbalanced datasets? 2022
- Pollen identification by its2 metabarcoding: curation of the sequences retrieved from genbank to build a reference database 2022
- Its2 metabarcoding: a promising approach for identification of botanical origin of bee-collected pollen 2021
- Identification of botanical origin of bee-collected mixed pollen samples: a comparison between palynological and DNA metabarcoding methods. 17-18. 2020
- Introducing the INSIGNIA project: Environmental monitoring of pesticides use through honey bees. 112-112. 2019
- Introducing the INSIGNIA project: environmental monitoring of pesticide use through honey bees. 55-56. 2019
- Numerical simulation of the biological control of the chestnut gall wasp with T. Sinensis. CEUR Workshop Proceedings. 230-243. 2019
- clOpenCLip - Estendendo aplicações heterogéneas a ambientes distribuídos de forma transparente 2019
- Estudo Prático de Soluções de Virtualização Bare Metal 2017
- Experiences on object tracking using a many-core embedded system. 195-204. 2017
- Practical study of bare metal virtualization solutions 2017
- Genome-wide detection of signatures of selection in non- synonymous positions of iberian honey bee (Apis mellifera iberiensis). 61-62. 2016
- Searching for signatures of selection in the Iberian honey bee (Apis mellifera iberiensis) using allele-environment association approaches. 81-81. 2016
- Desempenho comparativo do BLAST e do mpiBLAST. 20-22. 2015
- Procurando sinais de selecção no genoma nuclear da abelha ibérica (Apis mellifera iberiensis Engel). 197-197. 2015
- Revisiting the Iberian honey bee (Apis mellifera iberiensis) contact zone: maternal and genome-wide nuclear variation provide support for secondary contact from historical refugia. 88-88. 2015
- Searching for signatures of selection in Iberian honey bee (Apis mellifera iberiensis) using whole genome sequences. 252-252. 2015
- Spatial patterns of single nucleotide polymorphisms (SNPs) support a scenario of secondary contact in Iberian honey bees (Apis mellifera iberiensis) 2015
- VScore: a software for management of large scale virtual screening projects in computer clusters 2015
- Análisis de introgresión en Apis mellifera iberiensis y Apis mellifera mellifera usando polimorfismos de nucleótidos simples (SNPs). 62-62. 2014
- Estrutura populacional e variabilidade genética da abelha ibérica (Apis mellifera iberiensis) revelada por marcadores do adn mitocondrial e nuclear: implicações na actividade apícola. 57-57. 2014
- Evaluating the performance of a variable number of SNPs for genetic identification and introgression analysis in the dark honey bee. 62-62. 2014
- Identificando genes que favorecen la adaptación local en Apis mellifera iberiensis. 56-56. 2014
- Maternal structure of Iberian honey bees inferred from whole mitochondrial genomes. 171-172. 2014
- Population structure of Iberian honey bees: concordance among mtDNA, geometric morphometrics and SNPs. 54-54. 2014
- Solving multilocal optimization problems with a recursive parallel search of the feasible region. 154-168. 2014
- Genome-wide scans detected signatures of selection in genes related with vision, xenobiotic metabolism, and immunity in the Iberian honey bee genome 2013
- How many SNPs are needed to provide an accurate estimate of lineage C introgression into black honey bees? 2013
- Inferência da estrutura populacional de Apis mellifera iberiensis utilizando marcadores nucleares (polimorfismo de nucleótido simples, SNP) e mitocondrial 2013
- Introgression levels of the Italian and carniolan honey bee subspecies into the black honey bee: a comparison between microsatellite and single nucleotide polymorphism (SNP) markers 2013
- PSSA - um método de otimização usando a computação paralela. 46-46. 2013
- VScore: uma plataforma para desenvolvimento de novos fármacos usando screening virtual 2013
- Effect of linkage disequilibrium on inferences of population structure and introgression of iberian and black honey bees 2012
- Introgression of lineage c honey bees into black honey bee populations: a genome-wide estimation using single nucleotide polymorphisms (SNPS) 2012
- Spatial patterns of genetic variation in the Iberian honey bee hybrid zone: a comparison between mitochondrial and nuclear DNA 2012
- Efficient partitioning strategies for distributed web crawling. 544-553. 2008
- Shortcut routing for Chord graphs in the Domus hash space. 316-323. 2008
- Full-speed scalability of the pDomus platform for DHTs. 69-76. 2007
- Impacto do robustecimento de sistemas no desempenho de serviços Internet 2006
- Deploying applications in Multi-SAN SMP clusters. 63-70. 2005
- meμ: unifying application modeling and cluster exploitation 2004
- ToCL: a thread oriented communication library to interface VIA and GM protocols. 1022-1031. 2003
- Distributed paged Hash tables. Lecture Notes in Computer Science. 2002
- High performance multithreaded message passing on a myrinet cluster. Advances in High Performance Computing. 241-250. 2002
- Scalable multithreading in a low latency myrinet cluster. Lecture Notes in Computer Science. 579-592. 2002
- Performance analysis of a wireless MAN. 358-361. 2001
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document
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journal article
- Projeto MITE- Varroa e vírus transmitidos: monItorização de muTações e dEsenvolvimento de ferramentas moleculares inovadoras. 90-91. 2024
- Reconstruction of Meteorological Records by Methods Based on Dimension Reduction of the Predictor Dataset. Computation. 98. 2023
- Autent+ Desenvolvimento de abordagem inovadoras com vista à valorização e exploração do potencial de mercado do mel Português. 41-42. 2020
- Using analog ensembles with alternative metrics for hindcasting with multistations. 1-17. 2020
- INSIGNIA: um projeto de monitorização ambiental de pesticidas através da utilização da abelha mellifera. O apicultor. 17-19. 2019
- Evaluation of type-1 hypervisors on desktop-class virtualization hosts. 86-101. 2017
- Deploying applications in multi-SAN SMP Clusters (extended version). International Journal of Computational Science and Engineering. 137-148. 2009
- Domus - an architecture for cluster-oriented distributed Hash tables. Lecture Notes in Computer Science. 2006
- RoCL: a resource oriented communication library. Lecture Notes in Computer Science. 2003
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thesis
Research
co-principal investigator on
Background
awards and honors
Contact
full name
- José Carlos Rufino Amaro
- J. Amaro